Box and whiskers plot.

Usage

geom_boxplot(mapping = NULL, data = NULL, stat = "boxplot", position = "dodge", ..., outlier.colour = NULL, outlier.color = NULL, outlier.shape = 19, outlier.size = 1.5, outlier.stroke = 0.5, notch = FALSE, notchwidth = 0.5, varwidth = FALSE, na.rm = FALSE, show.legend = NA, inherit.aes = TRUE)
stat_boxplot(mapping = NULL, data = NULL, geom = "boxplot", position = "dodge", ..., coef = 1.5, na.rm = FALSE, show.legend = NA, inherit.aes = TRUE)

Arguments

mapping
Set of aesthetic mappings created by aes or aes_. If specified and inherit.aes = TRUE (the default), it is combined with the default mapping at the top level of the plot. You must supply mapping if there is no plot mapping.
data
The data to be displayed in this layer. There are three options: If NULL, the default, the data is inherited from the plot data as specified in the call to ggplot. A data.frame, or other object, will override the plot data. All objects will be fortified to produce a data frame. See fortify for which variables will be created. A function will be called with a single argument, the plot data. The return value must be a data.frame., and will be used as the layer data.
position
Position adjustment, either as a string, or the result of a call to a position adjustment function.
...
other arguments passed on to layer. These are often aesthetics, used to set an aesthetic to a fixed value, like color = "red" or size = 3. They may also be parameters to the paired geom/stat.
outlier.colour, outlier.color, outlier.shape, outlier.size, outlier.stroke
Default aesthetics for outliers. Set to NULL to inherit from the aesthetics used for the box. In the unlikely event you specify both US and UK spellings of colour, the US spelling will take precedence.
notch
if FALSE (default) make a standard box plot. If TRUE, make a notched box plot. Notches are used to compare groups; if the notches of two boxes do not overlap, this suggests that the medians are significantly different.
notchwidth
for a notched box plot, width of the notch relative to the body (default 0.5)
varwidth
if FALSE (default) make a standard box plot. If TRUE, boxes are drawn with widths proportional to the square-roots of the number of observations in the groups (possibly weighted, using the weight aesthetic).
na.rm
If FALSE (the default), removes missing values with a warning. If TRUE silently removes missing values.
show.legend
logical. Should this layer be included in the legends? NA, the default, includes if any aesthetics are mapped. FALSE never includes, and TRUE always includes.
inherit.aes
If FALSE, overrides the default aesthetics, rather than combining with them. This is most useful for helper functions that define both data and aesthetics and shouldn't inherit behaviour from the default plot specification, e.g. borders.
geom, stat
Use to override the default connection between geom_boxplot and stat_boxplot.
coef
length of the whiskers as multiple of IQR. Defaults to 1.5

Description

The lower and upper "hinges" correspond to the first and third quartiles (the 25th and 75th percentiles). This differs slightly from the method used by the boxplot function, and may be apparent with small samples. See boxplot.stats for for more information on how hinge positions are calculated for boxplot.

Details

The upper whisker extends from the hinge to the highest value that is within 1.5 * IQR of the hinge, where IQR is the inter-quartile range, or distance between the first and third quartiles. The lower whisker extends from the hinge to the lowest value within 1.5 * IQR of the hinge. Data beyond the end of the whiskers are outliers and plotted as points (as specified by Tukey).

In a notched box plot, the notches extend 1.58 * IQR / sqrt(n). This gives a roughly 95 See McGill et al. (1978) for more details.

Aesthetics

geom_boxplot understands the following aesthetics (required aesthetics are in bold):

  • lower
  • middle
  • upper
  • x
  • ymax
  • ymin
  • alpha
  • colour
  • fill
  • linetype
  • shape
  • size
  • weight

Computed variables

width
width of boxplot

ymin
lower whisker = smallest observation greater than or equal to lower hinge - 1.5 * IQR

lower
lower hinge, 25% quantile

notchlower
lower edge of notch = median - 1.58 * IQR / sqrt(n)

middle
median, 50% quantile

notchupper
upper edge of notch = median + 1.58 * IQR / sqrt(n)

upper
upper hinge, 75% quantile

ymax
upper whisker = largest observation less than or equal to upper hinge + 1.5 * IQR

References

McGill, R., Tukey, J. W. and Larsen, W. A. (1978) Variations of box plots. The American Statistician 32, 12-16.

Examples

p <- ggplot(mpg, aes(class, hwy)) p + geom_boxplot()

p + geom_boxplot() + geom_jitter(width = 0.2)

p + geom_boxplot() + coord_flip()

p + geom_boxplot(notch = TRUE)
notch went outside hinges. Try setting notch=FALSE. notch went outside hinges. Try setting notch=FALSE.

p + geom_boxplot(varwidth = TRUE)

p + geom_boxplot(fill = "white", colour = "#3366FF")

# By default, outlier points match the colour of the box. Use # outlier.colour to override p + geom_boxplot(outlier.colour = "red", outlier.shape = 1)

# Boxplots are automatically dodged when any aesthetic is a factor p + geom_boxplot(aes(colour = drv))

# You can also use boxplots with continuous x, as long as you supply # a grouping variable. cut_width is particularly useful ggplot(diamonds, aes(carat, price)) + geom_boxplot()
Warning message: Continuous x aesthetic -- did you forget aes(group=...)?

ggplot(diamonds, aes(carat, price)) + geom_boxplot(aes(group = cut_width(carat, 0.25)))

# It's possible to draw a boxplot with your own computations if you # use stat = "identity": y <- rnorm(100) df <- data.frame( x = 1, y0 = min(y), y25 = quantile(y, 0.25), y50 = median(y), y75 = quantile(y, 0.75), y100 = max(y) ) ggplot(df, aes(x)) + geom_boxplot( aes(ymin = y0, lower = y25, middle = y50, upper = y75, ymax = y100), stat = "identity" )

See also

stat_quantile to view quantiles conditioned on a continuous variable, geom_jitter for another way to look at conditional distributions.